Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyketide cyclase / dehydrase and lipid transport | SAMN04488090_0512 | Not Available | Positive | 689438 - 689851 | 15529.8 |
| transcriptional regulator, marr family | SAMN04488090_0513 | Not Available | Positive | 689940 - 690377 | 16496.9 |
| cytochrome c peroxidase | SAMN04488090_0514 | Not Available | Negative | 690410 - 692170 | 65339.4 |
| hypothetical protein | SAMN04488090_0515 | Not Available | Negative | 692231 - 693709 | 53746.6 |
| hypothetical protein | SAMN04488090_0516 | Not Available | Positive | 693981 - 695123 | 41790.7 |
| hypothetical protein | SAMN04488090_0517 | Not Available | Negative | 695120 - 695605 | 18435.3 |
| nudix domain-containing protein | SAMN04488090_0518 | Not Available | Negative | 695649 - 696437 | 30979.0 |
| cytochrome c | SAMN04488090_0519 | Not Available | Positive | 696529 - 699267 | 99426.0 |
| hypothetical protein | SAMN04488090_0520 | Not Available | Positive | 699274 - 700125 | 32140.2 |
| hypothetical protein | SAMN04488090_0521 | Not Available | Positive | 700255 - 700932 | 24905.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
