Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488090_0502 | Not Available | Positive | 674335 - 675354 | 38295.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0503 | Not Available | Positive | 675556 - 678930 | 125198.0 |
| starch-binding associating with outer membrane | SAMN04488090_0504 | Not Available | Positive | 678943 - 680475 | 57630.3 |
| phospholipase c | SAMN04488090_0505 | Not Available | Positive | 680655 - 683090 | 92048.9 |
| ethanolamine:proton symporter, eat family | SAMN04488090_0506 | Not Available | Positive | 683192 - 684505 | 47077.9 |
| ethanolamine ammonia-lyase heavy chain | SAMN04488090_0507 | Not Available | Positive | 684502 - 685881 | 50475.5 |
| ethanolamine ammonia-lyase light chain | SAMN04488090_0508 | Not Available | Positive | 685881 - 686642 | 27220.6 |
| head domain of trimeric autotransporter adhesin | SAMN04488090_0509 | Not Available | Positive | 686779 - 687966 | 41220.4 |
| hemolysin iii | SAMN04488090_0510 | Not Available | Positive | 688036 - 688710 | 24527.5 |
| response regulator receiver domain-containing protein | SAMN04488090_0511 | Not Available | Negative | 688713 - 689126 | 15745.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
