Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-related sulfurtransferase | SAMN04488090_0039 | Not Available | Positive | 53193 - 53891 | 25379.5 |
| arylsulfatase b | SAMN04488090_0040 | Not Available | Positive | 53920 - 55293 | 50327.3 |
| uncharacterized sulfatase | SAMN04488090_0041 | Not Available | Positive | 55321 - 56715 | 51799.7 |
| iron complex outermembrane recepter protein | SAMN04488090_0042 | Not Available | Positive | 57389 - 59953 | 95377.0 |
| hypothetical protein | SAMN04488090_0043 | Not Available | Positive | 60185 - 60994 | 30535.3 |
| cold shock protein (beta-ribbon, cspa family) | SAMN04488090_0044 | Not Available | Negative | 61175 - 61366 | 6814.08 |
| cold-shock dna-binding protein family | SAMN04488090_0045 | Not Available | Positive | 61601 - 62035 | 16128.4 |
| hypothetical protein | SAMN04488090_0046 | Not Available | Negative | 62130 - 64256 | 80797.5 |
| hypothetical protein | SAMN04488090_0047 | Not Available | Negative | 64669 - 65400 | 28479.0 |
| res domain-containing protein | SAMN04488090_0048 | Not Available | Negative | 65995 - 66465 | 18123.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
