Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_5008 | Not Available | Positive | 6147345 - 6147820 | 17678.5 |
| two component transcriptional regulator, luxr family | SAMN04488090_5009 | Not Available | Negative | 6148216 - 6148839 | 23672.8 |
| d-serine deaminase, pyridoxal phosphate-dependent | SAMN04488090_5010 | Not Available | Negative | 6149186 - 6150271 | 39725.5 |
| gnt-i system high-affinity gluconate transporter | SAMN04488090_5011 | Not Available | Negative | 6150276 - 6151583 | 45928.3 |
| oligoendopeptidase f | SAMN04488090_5012 | Not Available | Positive | 6151719 - 6153437 | 66041.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_5013 | Not Available | Negative | 6153503 - 6155014 | 55098.1 |
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN04488090_5014 | Not Available | Positive | 6155121 - 6156452 | 52172.2 |
| dephospho-coa kinase | SAMN04488090_5015 | Not Available | Negative | 6156449 - 6157030 | 21637.9 |
| hypothetical protein | SAMN04488090_5016 | Not Available | Negative | 6157036 - 6157701 | 25005.4 |
| preprotein translocase subunit yajc | SAMN04488090_5017 | Not Available | Negative | 6157752 - 6158048 | 10880.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
