Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenite transporter, acr3 family | SAMN04488090_4997 | Not Available | Positive | 6132754 - 6133812 | 38958.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_4999 | Not Available | Positive | 6134993 - 6138874 | 147116.0 |
| two component transcriptional regulator, lyttr family | SAMN04488090_5000 | Not Available | Negative | 6139506 - 6140264 | 28884.1 |
| histidine kinase | SAMN04488090_5001 | Not Available | Negative | 6140264 - 6141232 | 37412.6 |
| hypothetical protein | SAMN04488090_5002 | Not Available | Negative | 6141246 - 6142160 | 34954.8 |
| lipoprotein-releasing system atp-binding protein | SAMN04488090_5003 | Not Available | Negative | 6142164 - 6142841 | 25004.3 |
| lipoprotein-releasing system permease protein | SAMN04488090_5004 | Not Available | Negative | 6142844 - 6144082 | 45038.7 |
| biotin-lipoyl like | SAMN04488090_5005 | Not Available | Negative | 6144087 - 6145187 | 40145.8 |
| outer membrane protein tolc | SAMN04488090_5006 | Not Available | Negative | 6145180 - 6146520 | 51115.4 |
| uncharacterized conserved protein, duf2147 family | SAMN04488090_5007 | Not Available | Negative | 6146524 - 6146910 | 14112.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
