Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_4987 | Not Available | Negative | 6116106 - 6118448 | 87411.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4988 | Not Available | Negative | 6119225 - 6125134 | 205158.0 |
| two component transcriptional regulator, luxr family | SAMN04488090_4989 | Not Available | Positive | 6125586 - 6126245 | 25150.0 |
| histidine kinase | SAMN04488090_4990 | Not Available | Positive | 6126266 - 6128212 | 73913.0 |
| histidine kinase | SAMN04488090_4991 | Not Available | Positive | 6128551 - 6129567 | 38364.5 |
| two component transcriptional regulator, lyttr family | SAMN04488090_4992 | Not Available | Positive | 6129564 - 6130346 | 30091.1 |
| hypothetical protein | SAMN04488090_4993 | Not Available | Positive | 6130448 - 6130846 | 15188.5 |
| hypothetical protein | SAMN04488090_4994 | Not Available | Positive | 6130854 - 6131452 | 22610.8 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04488090_4995 | Not Available | Positive | 6131453 - 6132316 | 30699.4 |
| protein tyrosine phosphatase | SAMN04488090_4996 | Not Available | Positive | 6132330 - 6132761 | 15922.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
