Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sana protein | SAMN04488090_4976 | Not Available | Negative | 6105352 - 6106077 | 27651.5 |
| topoisomerase-4 subunit a | SAMN04488090_4977 | Not Available | Negative | 6106118 - 6108763 | 99651.4 |
| nudix domain-containing protein | SAMN04488090_4978 | Not Available | Negative | 6108887 - 6109528 | 23903.1 |
| hypothetical protein | SAMN04488090_4979 | Not Available | Negative | 6109723 - 6111294 | 57026.0 |
| hypothetical protein | SAMN04488090_4980 | Not Available | Negative | 6112151 - 6112612 | 18171.8 |
| arac-type dna-binding protein | SAMN04488090_4981 | Not Available | Positive | 6112929 - 6113489 | 21556.7 |
| hypothetical protein | SAMN04488090_4982 | Not Available | Negative | 6113438 - 6113638 | 8076.18 |
| hypothetical protein | SAMN04488090_4984 | Not Available | Positive | 6114016 - 6114159 | 5439.13 |
| hypothetical protein | SAMN04488090_4985 | Not Available | Positive | 6114224 - 6114418 | 7692.09 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04488090_4986 | Not Available | Positive | 6114612 - 6116105 | 57061.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
