Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN04488090_4965 | Not Available | Positive | 6090528 - 6091175 | 24377.8 |
| signal transduction histidine kinase | SAMN04488090_4966 | Not Available | Negative | 6091161 - 6094214 | 114856.0 |
| tigr00341 family protein | SAMN04488090_4967 | Not Available | Negative | 6094578 - 6095900 | 49110.4 |
| csha-type fibril repeat-containing protein | SAMN04488090_4968 | Not Available | Positive | 6096828 - 6099512 | 92556.3 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4969 | Not Available | Positive | 6099515 - 6100573 | 37649.0 |
| helix-turn-helix domain-containing protein | SAMN04488090_4970 | Not Available | Positive | 6101178 - 6101447 | 10519.6 |
| hypothetical protein | SAMN04488090_4971 | Not Available | Positive | 6101450 - 6101710 | 10030.6 |
| Trna-ser | Not Available | Not Available | Positive | 6103321 - 6103411 | Not Available |
| l-asparaginase | SAMN04488090_4974 | Not Available | Negative | 6103459 - 6104529 | 39335.6 |
| tatd dnase family protein | SAMN04488090_4975 | Not Available | Negative | 6104526 - 6105311 | 29569.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
