Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein, duf1697 family | SAMN04488090_4935 | Not Available | Negative | 6054453 - 6054983 | 19785.0 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488090_4936 | Not Available | Negative | 6054995 - 6055432 | 16402.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_4937 | Not Available | Negative | 6055500 - 6056099 | 23387.1 |
| hypothetical protein | SAMN04488090_4938 | Not Available | Positive | 6056411 - 6057217 | 31361.8 |
| adenylylsulfate kinase | SAMN04488090_4939 | Not Available | Positive | 6057198 - 6057782 | 21460.9 |
| hypothetical protein | SAMN04488090_4940 | Not Available | Positive | 6057913 - 6058458 | 20962.7 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4941 | Not Available | Negative | 6058521 - 6061883 | 121869.0 |
| hypothetical protein | SAMN04488090_4942 | Not Available | Negative | 6062022 - 6063275 | 47164.6 |
| dna polymerase iii, alpha subunit | SAMN04488090_4943 | Not Available | Positive | 6063431 - 6067033 | 135896.0 |
| hypothetical protein | SAMN04488090_4944 | Not Available | Positive | 6067322 - 6068245 | 34181.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
