Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4925 | Not Available | Negative | 6038046 - 6040220 | 81038.8 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488090_4926 | Not Available | Negative | 6040327 - 6041685 | 50661.6 |
| glucose-1-phosphate adenylyltransferase | SAMN04488090_4927 | Not Available | Negative | 6041707 - 6042561 | 31708.9 |
| galactokinase | SAMN04488090_4928 | Not Available | Negative | 6042597 - 6043685 | 39824.6 |
| transcriptional regulator, laci family | SAMN04488090_4929 | Not Available | Negative | 6043844 - 6044839 | 37477.2 |
| core-2/i-branching enzyme | SAMN04488090_4930 | Not Available | Negative | 6044943 - 6045848 | 34537.5 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04488090_4931 | Not Available | Negative | 6045854 - 6046810 | 36864.0 |
| starch-binding associating with outer membrane | SAMN04488090_4932 | Not Available | Negative | 6047049 - 6048770 | 63751.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4933 | Not Available | Negative | 6048812 - 6052027 | 117696.0 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488090_4934 | Not Available | Positive | 6052428 - 6054341 | 71522.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
