Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cardiolipin synthase | SAMN04488090_4915 | Not Available | Positive | 6027904 - 6029373 | 55383.8 |
| hypothetical protein | SAMN04488090_4916 | Not Available | Positive | 6029510 - 6030001 | 18119.8 |
| hypothetical protein | SAMN04488090_4917 | Not Available | Positive | 6030161 - 6030466 | 11254.8 |
| iron complex outermembrane recepter protein | SAMN04488090_4918 | Not Available | Positive | 6030650 - 6033073 | 90786.3 |
| uncharacterized membrane protein ypha, doxx/surf4 family | SAMN04488090_4919 | Not Available | Negative | 6033156 - 6033587 | 15980.8 |
| peroxiredoxin | SAMN04488090_4920 | Not Available | Positive | 6033758 - 6034342 | 21327.7 |
| rhodanese-related sulfurtransferase | SAMN04488090_4921 | Not Available | Positive | 6034422 - 6034721 | 10876.2 |
| transposase | SAMN04488090_4922 | Not Available | Positive | 6034786 - 6035319 | 20864.3 |
| integrase core domain-containing protein | SAMN04488090_4923 | Not Available | Positive | 6035683 - 6036150 | 18347.4 |
| arylsulfatase a | SAMN04488090_4924 | Not Available | Negative | 6036583 - 6038046 | 55022.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
