Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488090_0482 | Not Available | Negative | 633855 - 634832 | 35964.5 |
| n-acetylglucosamine-6-phosphate deacetylase | SAMN04488090_0483 | Not Available | Negative | 635093 - 636295 | 43046.7 |
| glucose/galactose transporter | SAMN04488090_0484 | Not Available | Negative | 636283 - 637593 | 47186.4 |
| glucosamine-6-phosphate deaminase | SAMN04488090_0485 | Not Available | Negative | 637590 - 638333 | 27470.8 |
| oxidoreductase family, nad-binding rossmann fold | SAMN04488090_0486 | Not Available | Negative | 638347 - 639717 | 51257.3 |
| acetyl xylan esterase (axe1) | SAMN04488090_0487 | Not Available | Negative | 639714 - 641735 | 73599.0 |
| susd and ragb outer membrane lipoprotein | SAMN04488090_0488 | Not Available | Negative | 641735 - 643273 | 56518.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0489 | Not Available | Negative | 643287 - 646385 | 111659.0 |
| transcriptional regulator, laci family | SAMN04488090_0490 | Not Available | Positive | 646570 - 647583 | 37339.7 |
| dinb superfamily protein | SAMN04488090_0491 | Not Available | Positive | 647588 - 648109 | 20071.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
