Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4895 | Not Available | Negative | 6002530 - 6002748 | 8225.1 |
| helix-turn-helix | SAMN04488090_4896 | Not Available | Positive | 6002888 - 6003247 | 13968.7 |
| response regulator receiver domain-containing protein | SAMN04488090_4897 | Not Available | Negative | 6003227 - 6003649 | 16205.4 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN04488090_4898 | Not Available | Negative | 6003763 - 6004698 | 35446.2 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN04488090_4899 | Not Available | Positive | 6004885 - 6005439 | 20633.5 |
| alkyl hydroperoxide reductase subunit d | SAMN04488090_4900 | Not Available | Positive | 6005551 - 6006138 | 21578.2 |
| hypothetical protein | SAMN04488090_4901 | Not Available | Negative | 6006131 - 6007138 | 38326.4 |
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN04488090_4902 | Not Available | Negative | 6007138 - 6008565 | 55737.6 |
| hypothetical protein | SAMN04488090_4903 | Not Available | Negative | 6008638 - 6011355 | 102892.0 |
| udp-galactopyranose mutase | SAMN04488090_4904 | Not Available | Negative | 6011466 - 6012857 | 52701.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
