Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488090_4874 | Not Available | Negative | 5978027 - 5979064 | 38598.0 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_4875 | Not Available | Negative | 5979354 - 5979923 | 22384.7 |
| zu5 domain-containing protein | SAMN04488090_4876 | Not Available | Positive | 5980356 - 5981549 | 42511.1 |
| hypothetical protein | SAMN04488090_4877 | Not Available | Negative | 5981680 - 5982210 | 19395.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_4878 | Not Available | Negative | 5982207 - 5982671 | 18145.7 |
| hypothetical chaperone protein | SAMN04488090_4879 | Not Available | Negative | 5982776 - 5984029 | 45348.1 |
| kdo2-lipid iv(a) lauroyltransferase | SAMN04488090_4880 | Not Available | Positive | 5984413 - 5985261 | 33599.9 |
| Trna-val | Not Available | Not Available | Positive | 5985293 - 5985370 | Not Available |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488090_4883 | Not Available | Positive | 5986833 - 5987333 | 18853.7 |
| uncharacterized conserved protein | SAMN04488090_4884 | Not Available | Positive | 5987346 - 5987681 | 11947.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
