Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4864 | Not Available | Negative | 5964065 - 5967529 | 124191.0 |
| fecr family protein | SAMN04488090_4865 | Not Available | Negative | 5967545 - 5968585 | 38421.6 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_4866 | Not Available | Negative | 5968657 - 5969214 | 22311.7 |
| pentapeptide repeat-containing protein | SAMN04488090_4867 | Not Available | Negative | 5969315 - 5969881 | 21466.3 |
| 2'-5' rna ligase | SAMN04488090_4868 | Not Available | Positive | 5970068 - 5970637 | 22170.8 |
| arac family transcriptional regulator | SAMN04488090_4869 | Not Available | Positive | 5970677 - 5971153 | 17967.4 |
| hypothetical protein | SAMN04488090_4870 | Not Available | Positive | 5971440 - 5971586 | 4971.97 |
| arylsulfatase a | SAMN04488090_4871 | Not Available | Negative | 5971610 - 5972932 | 48708.1 |
| starch-binding associating with outer membrane | SAMN04488090_4872 | Not Available | Negative | 5972936 - 5974519 | 58225.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4873 | Not Available | Negative | 5974525 - 5977905 | 123988.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
