Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4854 | Not Available | Positive | 5947581 - 5950313 | 97157.1 |
| pectate lyase superfamily protein | SAMN04488090_4855 | Not Available | Positive | 5950462 - 5952381 | 68195.4 |
| uncharacterized membrane protein yhah, duf805 family | SAMN04488090_4856 | Not Available | Positive | 5952562 - 5952924 | 13778.7 |
| hypothetical protein | SAMN04488090_4857 | Not Available | Negative | 5952993 - 5954597 | 59605.6 |
| hypothetical protein | SAMN04488090_4858 | Not Available | Negative | 5954608 - 5955741 | 42753.5 |
| proline iminopeptidase | SAMN04488090_4859 | Not Available | Positive | 5956120 - 5957049 | 34788.2 |
| uncharacterized conserved protein ydhg, yjbr/cyay-like superfamily, duf1801 family | SAMN04488090_4860 | Not Available | Positive | 5957080 - 5957463 | 14730.7 |
| abc-type antimicrobial peptide transport system, permease component | SAMN04488090_4861 | Not Available | Negative | 5957510 - 5959882 | 88319.5 |
| duplicated orphan permease | SAMN04488090_4862 | Not Available | Negative | 5959885 - 5962251 | 86650.8 |
| starch-binding associating with outer membrane | SAMN04488090_4863 | Not Available | Negative | 5962442 - 5964043 | 59560.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
