Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine efflux transporter rhta | SAMN04488090_4834 | Not Available | Positive | 5932499 - 5933365 | 32016.4 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_4835 | Not Available | Positive | 5933428 - 5933991 | 21753.1 |
| putative intracellular protease/amidase | SAMN04488090_4836 | Not Available | Positive | 5934154 - 5934831 | 24566.0 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_4837 | Not Available | Positive | 5935014 - 5935496 | 18747.4 |
| hypothetical protein | SAMN04488090_4838 | Not Available | Positive | 5935502 - 5936158 | 25031.0 |
| hypothetical protein | SAMN04488090_4839 | Not Available | Negative | 5936137 - 5937069 | 34958.6 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4840 | Not Available | Positive | 5937238 - 5937651 | 15184.2 |
| uncharacterized oxidoreductase | SAMN04488090_4841 | Not Available | Negative | 5937782 - 5938486 | 25158.8 |
| darcynin, protein of unknown function | SAMN04488090_4842 | Not Available | Negative | 5938483 - 5938821 | 13290.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_4843 | Not Available | Negative | 5938890 - 5939453 | 21625.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
