Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488090_4814 | Not Available | Negative | 5901253 - 5902134 | 33653.3 |
| o-glycosyl hydrolase | SAMN04488090_4815 | Not Available | Negative | 5902380 - 5903918 | 56114.8 |
| starch-binding associating with outer membrane | SAMN04488090_4816 | Not Available | Negative | 5903971 - 5905641 | 62142.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4817 | Not Available | Negative | 5905654 - 5908782 | 113858.0 |
| signal transduction histidine kinase | SAMN04488090_4818 | Not Available | Negative | 5909199 - 5913347 | 155248.0 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488090_4819 | Not Available | Negative | 5913437 - 5914030 | 22325.5 |
| arac-type dna-binding protein | SAMN04488090_4820 | Not Available | Positive | 5914041 - 5914904 | 33268.8 |
| osmotically inducible protein osmc | SAMN04488090_4821 | Not Available | Positive | 5915035 - 5915448 | 14713.4 |
| acetyl esterase/lipase | SAMN04488090_4822 | Not Available | Positive | 5915481 - 5916518 | 37640.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4823 | Not Available | Negative | 5916607 - 5918952 | 81508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
