Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx-like family protein | SAMN04488090_0472 | Not Available | Positive | 625478 - 625876 | 14642.3 |
| sodium/proton antiporter, cpa1 family | SAMN04488090_0473 | Not Available | Positive | 626116 - 627696 | 58406.3 |
| hypothetical protein | SAMN04488090_0474 | Not Available | Negative | 627758 - 628534 | 28221.4 |
| abc-type multidrug transport system, atpase component | SAMN04488090_0475 | Not Available | Negative | 628746 - 629411 | 25295.8 |
| hypothetical protein | SAMN04488090_0476 | Not Available | Negative | 629413 - 629685 | 10109.5 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0477 | Not Available | Negative | 630093 - 630860 | 29550.8 |
| histidine kinase | SAMN04488090_0478 | Not Available | Negative | 630841 - 631851 | 38555.5 |
| hypothetical protein | SAMN04488090_0479 | Not Available | Negative | 631860 - 632279 | 14928.9 |
| cytochrome p460 | SAMN04488090_0480 | Not Available | Negative | 632276 - 633226 | 35418.6 |
| peroxiredoxin, ohr subfamily | SAMN04488090_0481 | Not Available | Negative | 633380 - 633829 | 15627.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
