Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN04488090_4784 | Not Available | Negative | 5864830 - 5865726 | 34615.2 |
| urea transporter | SAMN04488090_4785 | Not Available | Negative | 5865782 - 5866675 | 31778.4 |
| hypothetical protein | SAMN04488090_4786 | Not Available | Negative | 5866692 - 5867390 | 25967.4 |
| urease accessory protein | SAMN04488090_4787 | Not Available | Negative | 5867387 - 5868163 | 28960.0 |
| urease accessory protein | SAMN04488090_4788 | Not Available | Negative | 5868163 - 5868801 | 23501.5 |
| urease accessory protein | SAMN04488090_4789 | Not Available | Negative | 5868812 - 5869510 | 25761.2 |
| urease accessory protein | SAMN04488090_4790 | Not Available | Negative | 5869510 - 5870004 | 18931.9 |
| hypothetical protein | SAMN04488090_4791 | Not Available | Negative | 5870010 - 5870636 | 22509.9 |
| urease subunit alpha | SAMN04488090_4792 | Not Available | Negative | 5870657 - 5872366 | 61021.4 |
| urease subunit beta | SAMN04488090_4793 | Not Available | Negative | 5872363 - 5872740 | 13780.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
