Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component beta subunit | SAMN04488090_4774 | Not Available | Positive | 5849491 - 5850657 | 42989.9 |
| transcriptional regulator, arsr family | SAMN04488090_4775 | Not Available | Negative | 5850992 - 5851321 | 12034.7 |
| site-specific recombinase xerd | SAMN04488090_4776 | Not Available | Negative | 5852050 - 5853267 | 46283.2 |
| aaa domain-containing protein | SAMN04488090_4777 | Not Available | Positive | 5853815 - 5859628 | 217227.0 |
| uncharacterized membrane protein yoak, upf0700 family | SAMN04488090_4778 | Not Available | Negative | 5859751 - 5860476 | 26851.6 |
| transcriptional regulator, hxlr family | SAMN04488090_4779 | Not Available | Negative | 5860533 - 5860850 | 12030.8 |
| 2,4-dienoyl-coa reductase | SAMN04488090_4780 | Not Available | Positive | 5860952 - 5862010 | 39396.6 |
| putative nadh-flavin reductase | SAMN04488090_4781 | Not Available | Negative | 5862045 - 5862677 | 22772.4 |
| dna alkylation repair enzyme | SAMN04488090_4782 | Not Available | Negative | 5862817 - 5863425 | 23069.6 |
| protein of unknown function | SAMN04488090_4783 | Not Available | Positive | 5863608 - 5864726 | 42254.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
