Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_4754 | Not Available | Negative | 5827755 - 5828303 | 21791.9 |
| hypothetical protein | SAMN04488090_4755 | Not Available | Positive | 5828569 - 5829396 | 30404.9 |
| hemolysin, contains cbs domains | SAMN04488090_4756 | Not Available | Negative | 5829393 - 5830727 | 50492.6 |
| hypothetical protein | SAMN04488090_4757 | Not Available | Negative | 5830833 - 5831060 | 8723.85 |
| cytochrome c-type biogenesis protein ccmf | SAMN04488090_4758 | Not Available | Negative | 5831154 - 5833760 | 97800.4 |
| cytochrome c-type biogenesis protein ccme | SAMN04488090_4759 | Not Available | Negative | 5833782 - 5834201 | 15225.6 |
| hypothetical protein | SAMN04488090_4760 | Not Available | Negative | 5834216 - 5834425 | 7713.84 |
| heme exporter protein c | SAMN04488090_4761 | Not Available | Negative | 5834509 - 5835165 | 25060.2 |
| heme exporter protein b | SAMN04488090_4762 | Not Available | Negative | 5835261 - 5835923 | 24460.8 |
| ferrous iron transport protein a | SAMN04488090_4763 | Not Available | Positive | 5836219 - 5836446 | 8031.91 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
