Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4744 | Not Available | Positive | 5816568 - 5817314 | 27081.3 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488090_4745 | Not Available | Positive | 5817332 - 5818069 | 26417.9 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488090_4746 | Not Available | Positive | 5818105 - 5818854 | 27883.8 |
| glyoxylase i family protein | SAMN04488090_4747 | Not Available | Positive | 5818858 - 5819241 | 14560.2 |
| polyisoprenoid-binding protein ycei | SAMN04488090_4748 | Not Available | Negative | 5819466 - 5820059 | 20933.2 |
| dna-binding transcriptional regulator, marr family | SAMN04488090_4749 | Not Available | Negative | 5820109 - 5820600 | 18482.1 |
| hypothetical protein | SAMN04488090_4750 | Not Available | Positive | 5820792 - 5821622 | 31230.4 |
| starch-binding associating with outer membrane | SAMN04488090_4751 | Not Available | Negative | 5821679 - 5823181 | 56302.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4752 | Not Available | Negative | 5823238 - 5826624 | 122482.0 |
| fecr family protein | SAMN04488090_4753 | Not Available | Negative | 5826771 - 5827745 | 36718.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
