Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4734 | Not Available | Positive | 5802345 - 5802824 | 18132.7 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04488090_4735 | Not Available | Negative | 5802904 - 5803848 | 34089.0 |
| protein of unknown function | SAMN04488090_4736 | Not Available | Negative | 5804241 - 5806136 | 71441.2 |
| protein of unknown function | SAMN04488090_4737 | Not Available | Negative | 5806138 - 5808075 | 74041.7 |
| alkaline phosphatase | SAMN04488090_4738 | Not Available | Positive | 5808374 - 5809435 | 37923.2 |
| acyl-coa dehydrogenase | SAMN04488090_4739 | Not Available | Negative | 5809498 - 5811297 | 65373.1 |
| cytidine deaminase | SAMN04488090_4740 | Not Available | Positive | 5811474 - 5811971 | 18207.8 |
| hypothetical protein | SAMN04488090_4741 | Not Available | Negative | 5811968 - 5814481 | 94144.7 |
| glucokinase | SAMN04488090_4742 | Not Available | Negative | 5814684 - 5815625 | 33472.0 |
| short-chain dehydrogenase | SAMN04488090_4743 | Not Available | Negative | 5815728 - 5816459 | 26260.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
