Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4723 | Not Available | Positive | 5787546 - 5788178 | 24892.7 |
| caspase domain-containing protein | SAMN04488090_4724 | Not Available | Positive | 5788361 - 5789428 | 39403.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_4726 | Not Available | Negative | 5790901 - 5791566 | 24177.0 |
| epoxyqueuosine reductase | SAMN04488090_4727 | Not Available | Negative | 5791627 - 5792583 | 36634.6 |
| molecular chaperone grpe | SAMN04488090_4728 | Not Available | Positive | 5792688 - 5793251 | 20651.3 |
| molecular chaperone dnaj | SAMN04488090_4729 | Not Available | Positive | 5793320 - 5794465 | 41483.4 |
| alpha-galactosidase | SAMN04488090_4730 | Not Available | Negative | 5794693 - 5796897 | 83601.2 |
| uncharacterized conserved protein ycii, contains a putative active-site phosphohistidine | SAMN04488090_4731 | Not Available | Negative | 5796973 - 5797419 | 16470.2 |
| hypothetical protein | SAMN04488090_4732 | Not Available | Negative | 5797435 - 5798136 | 27093.6 |
| protein translocase subunit seca | SAMN04488090_4733 | Not Available | Negative | 5798612 - 5801989 | 128247.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
