Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | SAMN04488090_4713 | Not Available | Positive | 5779060 - 5780091 | 36646.3 |
| glutamate-5-semialdehyde dehydrogenase | SAMN04488090_4714 | Not Available | Positive | 5780104 - 5781369 | 46686.9 |
| trehalose utilisation | SAMN04488090_4715 | Not Available | Positive | 5781445 - 5782251 | 31230.0 |
| low affinity fe/cu permease | SAMN04488090_4716 | Not Available | Negative | 5782253 - 5782705 | 16786.0 |
| cbs domain-containing protein | SAMN04488090_4717 | Not Available | Negative | 5782784 - 5783449 | 25338.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488090_4718 | Not Available | Negative | 5783529 - 5784308 | 29151.2 |
| 16s rrna c967 or c1407 c5-methylase, rsmb/rsmf family | SAMN04488090_4719 | Not Available | Positive | 5784488 - 5785834 | 50162.6 |
| Trna-gly | Not Available | Not Available | Positive | 5785943 - 5786015 | Not Available |
| hypothetical protein | SAMN04488090_4721 | Not Available | Positive | 5786186 - 5787040 | 32002.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_4722 | Not Available | Positive | 5787053 - 5787559 | 20040.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
