Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | SAMN04488090_0462 | Not Available | Negative | 611131 - 611709 | 21720.1 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_0463 | Not Available | Positive | 612010 - 614358 | 88497.9 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN04488090_0464 | Not Available | Positive | 614582 - 615889 | 48068.2 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN04488090_0465 | Not Available | Positive | 615896 - 616906 | 37400.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_0466 | Not Available | Positive | 617189 - 617770 | 22929.6 |
| fecr family protein | SAMN04488090_0467 | Not Available | Positive | 617791 - 618801 | 37971.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0468 | Not Available | Positive | 618823 - 622356 | 129835.0 |
| starch-binding associating with outer membrane | SAMN04488090_0469 | Not Available | Positive | 622368 - 623831 | 54958.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_0470 | Not Available | Positive | 624065 - 624601 | 21534.9 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488090_0471 | Not Available | Positive | 624646 - 625359 | 26615.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
