Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | SAMN04488090_4703 | Not Available | Negative | 5767696 - 5768895 | 44213.6 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488090_4704 | Not Available | Negative | 5769063 - 5769731 | 25850.2 |
| leucyl/phenylalanyl-trna--protein transferase | SAMN04488090_4705 | Not Available | Positive | 5770116 - 5770745 | 23914.4 |
| putative auto-transporter adhesin, head gin domain | SAMN04488090_4706 | Not Available | Negative | 5770831 - 5771520 | 24228.5 |
| zn-dependent protease with chaperone function | SAMN04488090_4707 | Not Available | Negative | 5771520 - 5773673 | 82112.9 |
| putative nadh-flavin reductase | SAMN04488090_4708 | Not Available | Negative | 5773778 - 5774410 | 22485.3 |
| transcriptional regulator, hxlr family | SAMN04488090_4709 | Not Available | Positive | 5774508 - 5774855 | 13241.2 |
| intein n-terminal splicing region | SAMN04488090_4710 | Not Available | Negative | 5774902 - 5775849 | 34319.1 |
| monoamine oxidase | SAMN04488090_4711 | Not Available | Negative | 5775871 - 5777424 | 57595.3 |
| histidinol-phosphate aminotransferase | SAMN04488090_4712 | Not Available | Negative | 5777518 - 5778717 | 43651.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
