Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN04488090_4693 | Not Available | Positive | 5757313 - 5758413 | 41133.5 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_4694 | Not Available | Positive | 5758561 - 5759802 | 44589.6 |
| hypothetical protein | SAMN04488090_4695 | Not Available | Negative | 5759836 - 5759973 | 5354.69 |
| hypothetical protein | SAMN04488090_4696 | Not Available | Negative | 5760041 - 5761504 | 54185.1 |
| acetylornithine deacetylase | SAMN04488090_4697 | Not Available | Negative | 5761501 - 5762583 | 40024.9 |
| adp-ribosylglycohydrolase | SAMN04488090_4698 | Not Available | Negative | 5762590 - 5763570 | 35174.6 |
| n-acetylglutamate kinase | SAMN04488090_4699 | Not Available | Negative | 5763615 - 5764397 | 27387.2 |
| ornithine carbamoyltransferase | SAMN04488090_4700 | Not Available | Negative | 5764487 - 5765491 | 37434.5 |
| acetylornithine aminotransferase | SAMN04488090_4701 | Not Available | Negative | 5765541 - 5766671 | 40896.2 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN04488090_4702 | Not Available | Negative | 5766684 - 5767640 | 34788.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
