Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4683 | Not Available | Positive | 5746121 - 5746933 | 31050.2 |
| nad+ kinase | SAMN04488090_4684 | Not Available | Positive | 5746991 - 5747866 | 32325.5 |
| hypothetical protein | SAMN04488090_4685 | Not Available | Positive | 5747967 - 5748980 | 37659.9 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_4686 | Not Available | Positive | 5749048 - 5749722 | 25108.2 |
| undecaprenyl pyrophosphate synthetase | SAMN04488090_4687 | Not Available | Positive | 5749827 - 5750567 | 27844.5 |
| beta-barrel assembly machine subunit bama | SAMN04488090_4688 | Not Available | Positive | 5750644 - 5753256 | 97364.3 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488090_4689 | Not Available | Positive | 5753313 - 5753897 | 22748.1 |
| periplasmic chaperone for outer membrane proteins skp | SAMN04488090_4690 | Not Available | Positive | 5753902 - 5754519 | 22490.1 |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN04488090_4691 | Not Available | Negative | 5754893 - 5755558 | 24823.3 |
| l-proline dehydrogenase | SAMN04488090_4692 | Not Available | Negative | 5755692 - 5756939 | 48139.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
