Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, luxr family | SAMN04488090_4672 | Not Available | Positive | 5732685 - 5733329 | 23800.0 |
| starch-binding associating with outer membrane | SAMN04488090_4674 | Not Available | Positive | 5736943 - 5738469 | 55668.6 |
| hypothetical protein | SAMN04488090_4675 | Not Available | Positive | 5738833 - 5739258 | 15690.2 |
| hypothetical protein | SAMN04488090_4676 | Not Available | Negative | 5739294 - 5739869 | 23022.7 |
| hypothetical protein | SAMN04488090_4677 | Not Available | Positive | 5740341 - 5741054 | 27286.8 |
| hypothetical protein | SAMN04488090_4678 | Not Available | Positive | 5741023 - 5741946 | 33649.5 |
| hypothetical protein | SAMN04488090_4679 | Not Available | Positive | 5741943 - 5743814 | 70299.0 |
| uncharacterized iron-regulated protein | SAMN04488090_4680 | Not Available | Negative | 5743881 - 5744735 | 31404.8 |
| acetyltransferase (gnat) domain-containing protein | SAMN04488090_4681 | Not Available | Negative | 5744739 - 5745137 | 14862.9 |
| thioredoxin | SAMN04488090_4682 | Not Available | Positive | 5745332 - 5745943 | 23283.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
