Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488090_4662 | Not Available | Positive | 5712617 - 5713690 | 40807.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4663 | Not Available | Positive | 5713976 - 5717389 | 124443.0 |
| starch-binding associating with outer membrane | SAMN04488090_4664 | Not Available | Positive | 5717411 - 5719141 | 64088.7 |
| hypothetical protein | SAMN04488090_4665 | Not Available | Positive | 5719197 - 5720162 | 36472.1 |
| quinoprotein glucose dehydrogenase | SAMN04488090_4666 | Not Available | Positive | 5720184 - 5722337 | 78537.6 |
| mannonate dehydratase | SAMN04488090_4667 | Not Available | Positive | 5722374 - 5723705 | 48900.4 |
| purple acid phosphatase, n-terminal domain | SAMN04488090_4668 | Not Available | Positive | 5723795 - 5724985 | 44453.6 |
| gdsl-like lipase/acylhydrolase family protein | SAMN04488090_4669 | Not Available | Positive | 5724989 - 5726809 | 68314.2 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN04488090_4670 | Not Available | Negative | 5727102 - 5729279 | 81040.6 |
| ligand-binding sensor domain-containing protein | SAMN04488090_4671 | Not Available | Positive | 5729551 - 5732583 | 114390.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
