Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN04488090_4642 | Not Available | Negative | 5686507 - 5687376 | 32234.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_4643 | Not Available | Negative | 5687500 - 5688150 | 25308.3 |
| protein of unknown function | SAMN04488090_4644 | Not Available | Negative | 5688289 - 5689086 | 30270.2 |
| predicted oxidoreductase | SAMN04488090_4645 | Not Available | Positive | 5689273 - 5690148 | 33035.5 |
| nicotinamidase-related amidase | SAMN04488090_4646 | Not Available | Negative | 5690394 - 5691032 | 23190.6 |
| n-acetylglucosamine kinase | SAMN04488090_4647 | Not Available | Negative | 5691082 - 5691984 | 31847.6 |
| molecular chaperone htpg | SAMN04488090_4648 | Not Available | Positive | 5692675 - 5694492 | 68211.3 |
| hypothetical protein | SAMN04488090_4649 | Not Available | Negative | 5694545 - 5696170 | 61316.6 |
| predicted transcriptional regulator | SAMN04488090_4650 | Not Available | Negative | 5696177 - 5696533 | 13726.5 |
| hypothetical protein | SAMN04488090_4651 | Not Available | Negative | 5696802 - 5698682 | 71703.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
