Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN04488090_4622 | Not Available | Negative | 5663704 - 5664711 | 37065.3 |
| cupin-like domain-containing protein | SAMN04488090_4623 | Not Available | Negative | 5664823 - 5665713 | 34663.9 |
| hypothetical protein | SAMN04488090_4624 | Not Available | Negative | 5665850 - 5666038 | 6739.53 |
| ribosome biogenesis gtpase | SAMN04488090_4625 | Not Available | Negative | 5666069 - 5666995 | 34426.0 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN04488090_4626 | Not Available | Negative | 5666980 - 5668194 | 46539.6 |
| bacillithiol system protein ytxj | SAMN04488090_4627 | Not Available | Positive | 5668291 - 5668626 | 12586.8 |
| glycosyl transferase family 2 | SAMN04488090_4628 | Not Available | Negative | 5668623 - 5669555 | 35681.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN04488090_4629 | Not Available | Negative | 5669548 - 5670489 | 35923.5 |
| macrocin-o-methyltransferase (tylf) | SAMN04488090_4630 | Not Available | Positive | 5670649 - 5671434 | 29974.9 |
| glycosyl transferase family 2 | SAMN04488090_4631 | Not Available | Positive | 5671436 - 5672329 | 34488.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
