Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helicase | SAMN04488090_4612 | Not Available | Negative | 5652562 - 5654958 | 89876.4 |
| hypothetical protein | SAMN04488090_4613 | Not Available | Positive | 5655109 - 5655972 | 31816.8 |
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN04488090_4614 | Not Available | Negative | 5655973 - 5656434 | 17480.3 |
| o-succinylhomoserine sulfhydrylase | SAMN04488090_4615 | Not Available | Positive | 5656600 - 5657772 | 42041.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_4616 | Not Available | Positive | 5658276 - 5659043 | 27335.0 |
| phosphoribosylformylglycinamidine synthase subunit ii | SAMN04488090_4617 | Not Available | Positive | 5659240 - 5661477 | 80309.4 |
| hypothetical protein | SAMN04488090_4618 | Not Available | Positive | 5661718 - 5661933 | 8410.21 |
| hypothetical protein | SAMN04488090_4619 | Not Available | Positive | 5661940 - 5662263 | 12770.4 |
| hypothetical protein | SAMN04488090_4620 | Not Available | Positive | 5662265 - 5662660 | 15087.8 |
| hypothetical protein | SAMN04488090_4621 | Not Available | Positive | 5662672 - 5663601 | 35679.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
