Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine o-3-phosphate decarboxylase | SAMN04488090_0452 | Not Available | Positive | 601463 - 602470 | 37949.2 |
| adenosylcobinamide-phosphate synthase | SAMN04488090_0453 | Not Available | Positive | 602455 - 603384 | 34079.8 |
| predicted atpase | SAMN04488090_0454 | Not Available | Positive | 603363 - 603932 | 20841.0 |
| iron complex transport system substrate-binding protein | SAMN04488090_0455 | Not Available | Positive | 604216 - 605370 | 43043.1 |
| iron complex transport system permease protein | SAMN04488090_0456 | Not Available | Positive | 605367 - 606398 | 35819.2 |
| iron complex transport system atp-binding protein | SAMN04488090_0457 | Not Available | Positive | 606395 - 607369 | 35495.0 |
| atp:cob(i)alamin adenosyltransferase | SAMN04488090_0458 | Not Available | Positive | 607366 - 607938 | 21568.0 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN04488090_0459 | Not Available | Positive | 607935 - 608438 | 18967.7 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN04488090_0460 | Not Available | Negative | 608431 - 609489 | 39716.1 |
| hypothetical protein | SAMN04488090_0461 | Not Available | Negative | 610132 - 611019 | 32935.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
