Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4601 | Not Available | Negative | 5638253 - 5638882 | 22779.2 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN04488090_4602 | Not Available | Negative | 5638978 - 5640219 | 46305.0 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN04488090_4604 | Not Available | Negative | 5641704 - 5642399 | 25659.8 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04488090_4605 | Not Available | Positive | 5642626 - 5642982 | 13712.5 |
| trigger factor | SAMN04488090_4606 | Not Available | Negative | 5643281 - 5644600 | 50186.0 |
| Trna-leu | Not Available | Not Available | Positive | 5644742 - 5644823 | Not Available |
| gtp pyrophosphokinase | SAMN04488090_4608 | Not Available | Positive | 5645100 - 5647349 | 85511.5 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN04488090_4609 | Not Available | Positive | 5647546 - 5648043 | 19173.8 |
| adenylosuccinate synthetase | SAMN04488090_4610 | Not Available | Positive | 5648167 - 5649456 | 47860.4 |
| leucyl-trna synthetase | SAMN04488090_4611 | Not Available | Negative | 5649648 - 5652431 | 105536.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
