Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein yece, duf72 family | SAMN04488090_4591 | Not Available | Positive | 5626066 - 5626971 | 34725.9 |
| chitobiase/beta-hexosaminidase c-terminal domain-containing protein | SAMN04488090_4592 | Not Available | Positive | 5627113 - 5630330 | 118466.0 |
| tyrosyl-trna synthetase | SAMN04488090_4593 | Not Available | Negative | 5630409 - 5631704 | 48424.8 |
| hypothetical protein | SAMN04488090_4594 | Not Available | Negative | 5631718 - 5632716 | 37811.1 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | SAMN04488090_4595 | Not Available | Negative | 5632728 - 5633951 | 45100.1 |
| hypothetical protein | SAMN04488090_4596 | Not Available | Negative | 5633955 - 5634467 | 19284.3 |
| cob(i)alamin adenosyltransferase | SAMN04488090_4597 | Not Available | Positive | 5634769 - 5635326 | 21023.0 |
| branched chain amino acid aminotransferase apoenzyme | SAMN04488090_4598 | Not Available | Positive | 5635352 - 5636416 | 39913.7 |
| esterase-like activity of phytase | SAMN04488090_4599 | Not Available | Positive | 5636485 - 5637447 | 36439.2 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488090_4600 | Not Available | Negative | 5637448 - 5638182 | 27502.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
