Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04488090_4581 | Not Available | Positive | 5618644 - 5619096 | 17352.6 |
| hypothetical protein | SAMN04488090_4582 | Not Available | Negative | 5619098 - 5619565 | 17494.4 |
| hypothetical protein | SAMN04488090_4583 | Not Available | Negative | 5619571 - 5619924 | 12837.8 |
| gas vesicle protein | SAMN04488090_4584 | Not Available | Negative | 5620006 - 5620320 | 11101.3 |
| response regulator receiver domain-containing protein | SAMN04488090_4585 | Not Available | Positive | 5620705 - 5621046 | 12695.2 |
| starvation-inducible dna-binding protein | SAMN04488090_4586 | Not Available | Positive | 5621122 - 5621625 | 19255.8 |
| hypothetical protein | SAMN04488090_4587 | Not Available | Negative | 5621697 - 5622188 | 18724.0 |
| maltooligosyl trehalose hydrolase | SAMN04488090_4588 | Not Available | Negative | 5622240 - 5624051 | 68359.6 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_4589 | Not Available | Negative | 5624282 - 5625490 | 44704.6 |
| regulatory protein | SAMN04488090_4590 | Not Available | Positive | 5625609 - 5626061 | 17395.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
