Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l34 | SAMN04488090_4571 | Not Available | Positive | 5605905 - 5606063 | 6374.77 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488090_4572 | Not Available | Negative | 5606256 - 5608055 | 67647.0 |
| nucleoside transporter | SAMN04488090_4573 | Not Available | Positive | 5608280 - 5609470 | 43134.6 |
| predicted dehydrogenase | SAMN04488090_4574 | Not Available | Positive | 5609483 - 5610676 | 44480.8 |
| pas domain s-box-containing protein | SAMN04488090_4575 | Not Available | Negative | 5610754 - 5612190 | 53714.0 |
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN04488090_4576 | Not Available | Negative | 5612215 - 5612676 | 17632.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_4577 | Not Available | Negative | 5612713 - 5613861 | 44128.6 |
| two-component system, ntrc family, response regulator hydg | SAMN04488090_4578 | Not Available | Negative | 5613939 - 5615393 | 54639.0 |
| rna polymerase, sigma 54 subunit, rpon/sigl | SAMN04488090_4579 | Not Available | Negative | 5615488 - 5616942 | 55267.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_4580 | Not Available | Positive | 5617197 - 5618624 | 54368.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
