Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_4551 | Not Available | Negative | 5587559 - 5588188 | 22909.5 |
| gdp-l-fucose synthase | SAMN04488090_4552 | Not Available | Negative | 5588410 - 5589351 | 35720.9 |
| hypothetical protein | SAMN04488090_4553 | Not Available | Positive | 5589519 - 5590559 | 39659.1 |
| bacteriocin-protection, ydei or ompd-associated | SAMN04488090_4554 | Not Available | Positive | 5590565 - 5591038 | 17858.7 |
| uncharacterized metal-binding protein yced, duf177 family | SAMN04488090_4555 | Not Available | Positive | 5591173 - 5591733 | 21809.7 |
| large subunit ribosomal protein l32 | SAMN04488090_4556 | Not Available | Positive | 5591799 - 5591993 | 7506.85 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN04488090_4557 | Not Available | Positive | 5592148 - 5593083 | 33282.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN04488090_4558 | Not Available | Positive | 5593139 - 5594131 | 35668.7 |
| translation elongation factor p (ef-p) | SAMN04488090_4559 | Not Available | Positive | 5594293 - 5594856 | 21244.5 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | SAMN04488090_4560 | Not Available | Positive | 5594893 - 5595357 | 16124.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
