Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_4541 | Not Available | Negative | 5577491 - 5577865 | 14528.3 |
| d-sedoheptulose 7-phosphate isomerase | SAMN04488090_4542 | Not Available | Positive | 5577967 - 5578530 | 20709.5 |
| hypothetical protein | SAMN04488090_4543 | Not Available | Negative | 5578508 - 5579416 | 33704.0 |
| putative f0f1-atpase subunit ca2+/mg2+ transporter | SAMN04488090_4544 | Not Available | Negative | 5579418 - 5579627 | 7759.66 |
| tetratricopeptide repeat-containing protein | SAMN04488090_4545 | Not Available | Positive | 5579730 - 5581889 | 81047.2 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_4546 | Not Available | Positive | 5581895 - 5582461 | 22168.7 |
| hypothetical protein | SAMN04488090_4547 | Not Available | Positive | 5582532 - 5582942 | 15544.6 |
| atp-binding cassette protein, chvd family | SAMN04488090_4548 | Not Available | Negative | 5582960 - 5584627 | 62277.2 |
| protein of unknown function | SAMN04488090_4549 | Not Available | Positive | 5584714 - 5586015 | 51297.4 |
| peptidase family s41 | SAMN04488090_4550 | Not Available | Positive | 5586136 - 5587500 | 49381.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
