Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanine-d-alanine ligase | SAMN04488090_4531 | Not Available | Positive | 5567521 - 5569215 | 63095.8 |
| hypothetical protein | SAMN04488090_4532 | Not Available | Negative | 5569278 - 5570237 | 35940.5 |
| phosphoglucomutase | SAMN04488090_4533 | Not Available | Positive | 5570601 - 5572358 | 64181.6 |
| hypothetical protein | SAMN04488090_4534 | Not Available | Positive | 5572423 - 5572869 | 16101.1 |
| uncharacterized damage-inducible protein dinb (forms a four-helix bundle) | SAMN04488090_4535 | Not Available | Negative | 5572950 - 5573477 | 19564.7 |
| alpha/beta hydrolase family protein | SAMN04488090_4536 | Not Available | Positive | 5573661 - 5574821 | 42854.4 |
| atp synthase f1 subcomplex delta subunit | SAMN04488090_4537 | Not Available | Negative | 5574916 - 5575455 | 20020.2 |
| atp synthase f0 subcomplex b subunit | SAMN04488090_4538 | Not Available | Negative | 5575505 - 5575999 | 18306.3 |
| atp synthase f0 subcomplex c subunit | SAMN04488090_4539 | Not Available | Negative | 5576103 - 5576360 | 8191.35 |
| atp synthase f0 subcomplex a subunit | SAMN04488090_4540 | Not Available | Negative | 5576414 - 5577478 | 39345.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
