Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pepsy-associated tm region | SAMN04488090_0442 | Not Available | Positive | 586299 - 587771 | 56781.4 |
| hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase | SAMN04488090_0443 | Not Available | Positive | 587768 - 589063 | 47644.8 |
| predicted atpase | SAMN04488090_0444 | Not Available | Positive | 589060 - 589932 | 32746.0 |
| cobaltochelatase cobn subunit | SAMN04488090_0445 | Not Available | Positive | 589935 - 594167 | 156286.0 |
| hypothetical protein | SAMN04488090_0446 | Not Available | Negative | 594336 - 595079 | 28412.9 |
| predicted dehydrogenase | SAMN04488090_0447 | Not Available | Positive | 595143 - 596228 | 40866.2 |
| proton-dependent oligopeptide transporter, pot family | SAMN04488090_0448 | Not Available | Positive | 596233 - 597567 | 48689.9 |
| methyltransferase domain-containing protein | SAMN04488090_0449 | Not Available | Positive | 597570 - 598205 | 23583.0 |
| protoporphyrin ix magnesium-chelatase | SAMN04488090_0450 | Not Available | Positive | 598211 - 600001 | 64280.5 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN04488090_0451 | Not Available | Positive | 599998 - 601446 | 52704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
