Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit 2 | SAMN04488090_4501 | Not Available | Positive | 5537860 - 5538801 | 35679.1 |
| sulfate adenylyltransferase subunit 1 | SAMN04488090_4502 | Not Available | Positive | 5538856 - 5540109 | 46544.6 |
| glyoxalase family protein | SAMN04488090_4503 | Not Available | Positive | 5540524 - 5541462 | 34903.1 |
| predicted heme/steroid binding protein | SAMN04488090_4504 | Not Available | Negative | 5541620 - 5541853 | 8948.5 |
| hypothetical protein | SAMN04488090_4505 | Not Available | Positive | 5541961 - 5542413 | 16470.6 |
| thiamine-phosphate kinase | SAMN04488090_4506 | Not Available | Positive | 5542507 - 5543544 | 37583.8 |
| mannose-1-phosphate guanylyltransferase (gdp) | SAMN04488090_4507 | Not Available | Negative | 5543644 - 5544714 | 40428.1 |
| protein of unknown function | SAMN04488090_4508 | Not Available | Negative | 5544770 - 5545810 | 39126.4 |
| tonb-dependent receptor plug domain | SAMN04488090_4509 | Not Available | Positive | 5546008 - 5548989 | 108008.0 |
| putative membrane protein | SAMN04488090_4510 | Not Available | Negative | 5549058 - 5549735 | 25867.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
