Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein involved in gliding motility glde | SAMN04488090_4491 | Not Available | Positive | 5530722 - 5532101 | 51855.6 |
| cephalosporin-c deacetylase | SAMN04488090_4492 | Not Available | Positive | 5532180 - 5533481 | 47219.5 |
| stress responsive a/b barrel domain | SAMN04488090_4493 | Not Available | Positive | 5533490 - 5533879 | 14884.9 |
| glucose 1-dehydrogenase | SAMN04488090_4494 | Not Available | Negative | 5533961 - 5534755 | 28358.2 |
| hypothetical protein | SAMN04488090_4495 | Not Available | Negative | 5534808 - 5534990 | 6907.49 |
| hypothetical protein | SAMN04488090_4496 | Not Available | Positive | 5535199 - 5535456 | 9168.19 |
| hypothetical protein | SAMN04488090_4497 | Not Available | Negative | 5535486 - 5535920 | 16887.5 |
| hypothetical protein | SAMN04488090_4498 | Not Available | Negative | 5535940 - 5536359 | 15203.4 |
| hypothetical protein | SAMN04488090_4499 | Not Available | Positive | 5536521 - 5536703 | 7122.42 |
| phosphoadenylylsulfate reductase (thioredoxin) | SAMN04488090_4500 | Not Available | Positive | 5537109 - 5537813 | 26922.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
