Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN04488090_4481 | Not Available | Negative | 5517419 - 5519089 | 62225.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_4482 | Not Available | Negative | 5519100 - 5522480 | 125013.0 |
| fecr family protein | SAMN04488090_4483 | Not Available | Negative | 5522641 - 5523657 | 37878.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_4484 | Not Available | Negative | 5523734 - 5524327 | 23178.5 |
| hypothetical protein | SAMN04488090_4485 | Not Available | Positive | 5524747 - 5525388 | 23281.7 |
| ribonuclease g | SAMN04488090_4486 | Not Available | Negative | 5525440 - 5526996 | 59170.6 |
| tetratricopeptide repeat-containing protein | SAMN04488090_4487 | Not Available | Negative | 5527385 - 5528206 | 30543.4 |
| dna-binding protein hu-beta | SAMN04488090_4488 | Not Available | Negative | 5528401 - 5528700 | 10850.1 |
| a/g-specific dna-adenine glycosylase | SAMN04488090_4489 | Not Available | Positive | 5528997 - 5530031 | 39118.9 |
| single-strand binding protein | SAMN04488090_4490 | Not Available | Positive | 5530132 - 5530602 | 17166.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
