Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_4471 | Not Available | Negative | 5501445 - 5504060 | 94693.0 |
| atp-dependent dna helicase recq | SAMN04488090_4472 | Not Available | Positive | 5504239 - 5506182 | 72861.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_4473 | Not Available | Positive | 5506419 - 5509223 | 105311.0 |
| glpgli family protein | SAMN04488090_4474 | Not Available | Positive | 5509230 - 5509979 | 29063.0 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN04488090_4475 | Not Available | Positive | 5510176 - 5510877 | 24766.3 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN04488090_4476 | Not Available | Negative | 5510940 - 5511998 | 38916.9 |
| hypothetical protein | SAMN04488090_4477 | Not Available | Negative | 5512258 - 5512485 | 8425.47 |
| carboxymethylenebutenolidase | SAMN04488090_4478 | Not Available | Negative | 5512517 - 5513401 | 32029.4 |
| hypothetical protein | SAMN04488090_4479 | Not Available | Negative | 5513505 - 5514767 | 47188.7 |
| hypothetical protein | SAMN04488090_4480 | Not Available | Negative | 5515054 - 5517411 | 86725.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
