Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding-associated putative abc transporter substrate-binding component gldg | SAMN04488090_4461 | Not Available | Positive | 5488501 - 5490150 | 61503.1 |
| signal transduction histidine kinase | SAMN04488090_4462 | Not Available | Positive | 5490292 - 5494218 | 148831.0 |
| hypothetical protein | SAMN04488090_4463 | Not Available | Positive | 5494246 - 5494956 | 26792.3 |
| hypothetical protein | SAMN04488090_4464 | Not Available | Positive | 5494960 - 5495268 | 11195.1 |
| phosphoglycerate mutase | SAMN04488090_4465 | Not Available | Negative | 5495342 - 5496868 | 55885.5 |
| protein tyrosine phosphatase | SAMN04488090_4466 | Not Available | Negative | 5496952 - 5497434 | 18317.6 |
| cell division protein ftsb | SAMN04488090_4467 | Not Available | Negative | 5497458 - 5497754 | 11634.0 |
| enolase | SAMN04488090_4468 | Not Available | Negative | 5497860 - 5499140 | 46059.7 |
| uridine kinase | SAMN04488090_4469 | Not Available | Negative | 5499329 - 5499973 | 25136.2 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04488090_4470 | Not Available | Negative | 5500056 - 5501387 | 49462.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
