Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hexosaminidase | SAMN04488090_4451 | Not Available | Negative | 5478281 - 5480842 | 95307.8 |
| predicted acyltransferase | SAMN04488090_4452 | Not Available | Positive | 5480932 - 5482014 | 39563.7 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | SAMN04488090_4453 | Not Available | Negative | 5482052 - 5482900 | 31212.7 |
| hypothetical protein | SAMN04488090_4454 | Not Available | Negative | 5483161 - 5483322 | 6043.15 |
| fructose-bisphosphate aldolase | SAMN04488090_4455 | Not Available | Positive | 5483372 - 5484457 | 39634.8 |
| 3-methyladenine dna glycosylase alkd | SAMN04488090_4456 | Not Available | Negative | 5484542 - 5485243 | 26965.5 |
| nad(p)h-dependent fmn reductase | SAMN04488090_4457 | Not Available | Positive | 5485327 - 5485851 | 19157.1 |
| hypothetical protein | SAMN04488090_4458 | Not Available | Negative | 5485899 - 5486912 | 35604.6 |
| heat repeat-containing protein | SAMN04488090_4459 | Not Available | Negative | 5486919 - 5487827 | 34202.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_4460 | Not Available | Negative | 5487827 - 5488339 | 20182.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
